[Dock-fans] (no subject)
michael massiah
massiah at biochem.okstate.edu
Thu Aug 23 09:28:15 PDT 2007
Hi
We are trying to use Dock6 to perform flexible docking but have been
running into problem. We get the following error.
Molecule: 19mer-1.pdb
Elapsed time: 11 seconds
ERROR: Could not complete growth.
Confirm grid box is large enough to contain
ligand and try increasing max_orients.
We think the problem is with the sph file. we have an old sph file
that works but any newly generated sph file does not. the difference
in spheres between the old sph and new sph files are very very subtle
in terms of their xyz coordinates and they cover the same area, when
we superimposed the spheres. but no matter what we do, we can get
newer sph files to work. Any suggestion.
Mike
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