[Dock-fans] dock time?

Scott Brozell sbrozell at scripps.edu
Thu Oct 11 08:10:03 PDT 2007


Hi,

On Thu, 11 Oct 2007,  wrote:

> I am a freshman to student DOCK6.0. I met some questions during using it.
> The grid.nrg was about 30M, then i run dock6. But it has spent about 24 hours , it
> is not end now. i dont know why??
> Any suggestion is highly appreciated!

Since you didnt supply many clues,
the general advice is to run the tutorials
http://dock.compbio.ucsf.edu/DOCK_6/tutorials/index.htm
and make incremental changes with plenty of trial runs.

Searching the archives
http://dock.compbio.ucsf.edu/DOCK_6/index.htm
with keywords such as, time or grid size finds:
http://blur.compbio.ucsf.edu/pipermail/dock-fans/2006-August/000679.html
http://blur.compbio.ucsf.edu/pipermail/dock-fans/2005-May/000118.html

Scott



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