[Dock-fans] RMSD

Imtiaz M. biobrain at gmail.com
Wed Oct 31 10:38:52 PDT 2007


Dear All,

In my dock.in file i have selected the RMSD as yes. now in my
dock_ranked.mol2 I am getting a value RMSD 0.98786

Can any body tell me what that RMSD actually mean? i.e This root mean
square deviation is between what and what?

Imtiaz


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