[Dock-fans] mpi - undefined reference

[Gokcen Eren]

Hi all again,
I'm still trying to install DOCK6.1:( My last error is this :

Starting installation of
DOCK v6.1
at Thu Mar  6 16:00:24 EET 2008.

cd ../src && make install
make[1]: Entering directory `/home/gokcen/dock6/src'
cd dock && make install
make[2]: Entering directory `/home/gokcen/dock6/src/dock'
cd nab && make
make[3]: Entering directory `/home/gokcen/dock6/src/dock/nab'
ar rv nab.a molio.o prm.o sff.o traceback.o select_atoms.o memutil.o
reslib.o jacobi.o molutil.o chirvol.o regexp.o binpos.o time.o rand2.o
conjgrad.o database.o tleap.o
r - molio.o
r - prm.o
r - sff.o
r - traceback.o
r - select_atoms.o
r - memutil.o
r - reslib.o
r - jacobi.o
r - molutil.o
r - chirvol.o
r - regexp.o
r - binpos.o
r - time.o
r - rand2.o
r - conjgrad.o
r - database.o
r - tleap.o
ranlib nab.a
make[3]: Leaving directory `/home/gokcen/dock6/src/dock/nab'
g++ -O2 -o dock6 amber_typer.o base_mpi.o base_score.o conf_gen.o dock.o
dockmol.o library_file.o master_score.o orient.o score.o simplex.o
sphere.oscore_solvent.o score_amber.o
sasa.o score_chemgrid.o utils.o nab/nab.a -lm -lpthread
base_mpi.o: In function `Base_MPI::barrier()':
base_mpi.cpp:(.text+0x11e): undefined reference to `MPI_Barrier'
base_mpi.o: In function `Base_MPI::listen_for_request()':
base_mpi.cpp:(.text+0x16d): undefined reference to `MPI_Recv'
base_mpi.o: In function `Base_MPI::finalize_mpi()':
base_mpi.cpp:(.text+0x395): undefined reference to `MPI_Finalize'
base_mpi.o: In function `Base_MPI::initialize_mpi(int*, char***)':
base_mpi.cpp:(.text+0x3c4): undefined reference to `MPI_Init'
base_mpi.cpp:(.text+0x3d7): undefined reference to `MPI_Comm_rank'
base_mpi.cpp:(.text+0x3ed): undefined reference to `MPI_Comm_size'
base_mpi.cpp:(.text+0x3fd): undefined reference to `MPI_Finalize'
base_mpi.o: In function `Base_MPI::receive_recv_queue()':
base_mpi.cpp:(.text+0x11d4): undefined reference to `MPI_Send'
base_mpi.cpp:(.text+0x1210): undefined reference to `MPI_Recv'
base_mpi.cpp:(.text+0x124f): undefined reference to `MPI_Recv'
base_mpi.cpp:(.text+0x12a8): undefined reference to `MPI_Recv'
base_mpi.cpp:(.text+0x12f1): undefined reference to `MPI_Recv'
base_mpi.cpp:(.text+0x1388): undefined reference to `MPI_Recv'
base_mpi.o:base_mpi.cpp:(.text+0x13d1): more undefined references to
`MPI_Recv' follow
base_mpi.o: In function `Base_MPI::send_queue_request()':
base_mpi.cpp:(.text+0x176d): undefined reference to `MPI_Send'
base_mpi.cpp:(.text+0x17aa): undefined reference to `MPI_Recv'
base_mpi.cpp:(.text+0x17eb): undefined reference to `MPI_Recv'
base_mpi.cpp:(.text+0x1834): undefined reference to `MPI_Recv'
base_mpi.o: In function `Base_MPI::recv_queue_request()':
base_mpi.cpp:(.text+0x23d1): undefined reference to `MPI_Send'
base_mpi.cpp:(.text+0x240e): undefined reference to `MPI_Recv'
base_mpi.cpp:(.text+0x2441): undefined reference to `MPI_Send'
base_mpi.cpp:(.text+0x2477): undefined reference to `MPI_Send'
base_mpi.cpp:(.text+0x257a): undefined reference to `MPI_Send'
base_mpi.cpp:(.text+0x25ba): undefined reference to `MPI_Send'
base_mpi.cpp:(.text+0x25fb): undefined reference to `MPI_Send'
base_mpi.o:base_mpi.cpp:(.text+0x263b): more undefined references to
`MPI_Send' follow
dock.o: In function `main':
dock.cpp:(.text+0x999): undefined reference to `MPI_Get_processor_name'
collect2: ld returned 1 exit status
make[2]: *** [dock6] Error 1
make[2]: Leaving directory `/home/gokcen/dock6/src/dock'
make[1]: *** [dock6] Error 2
make[1]: Leaving directory `/home/gokcen/dock6/src'
make: *** [install] Error 2

Can anyone help me please?

Gokcen
-------------- next part --------------
An HTML attachment was scrubbed...
URL: http://blur.compbio.ucsf.edu/pipermail/dock-fans/attachments/20080306/0f089453/attachment.html