[Dock-fans] dms error

Scott Brozell sbrozell at scripps.edu
Thu Mar 13 19:34:13 PDT 2008


Hi,

On Fri, 29 Feb 2008, Nitin Bhardwaj wrote:

>   I have been struggling for the past three days to just repeat the dock6
> tutorial. I am stuck at step 2 which is sphere generation. I have installed
> dms on four different machines and with the same rec_noH.pdb file as on the
> tutorial, I can not get dms to run. Everytime it gives me this increasingly
> frustrating message:
> 
> 2317 atoms
>         S       11
>         O       444
>         N       389
>         C       1473
> execl: Not a directory
> 
> Once again, this is with the exact same rec_noH.pdb file as in the tutorial.
> I should at least be able to repeat the tutorial. I am running dms only on
> my local machine.

This problem has occurred before, but i didnt find a solution posted.
It is likely a installation/platform quirk.
Send verbatim verbose details: OS, exact installtion commands, etc.

http://blur.compbio.ucsf.edu/pipermail/dock-fans/2005-August/000293.html

Scott




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