[Dock-fans] Amber Deftn parameter file problem!!!!!!!

raghu bhagavat rag_vocal at yahoo.co.in
Fri May 23 01:35:58 PDT 2008


hi......
 
i am followin the on-line tutorials for dock6 using Chimera.......for the 1abe protein complex........
i am havin an error during the grid stage with the amber parameter files.........the below file i am not able to get it..........the output in grid.out shows no file or directry by this name...........
vdw_definition_file            ../../../parameters/vdw_AMBER_parm99.defn

how to get this file .......shud the amber be installed or is it inbuilt..........i am unable to proceed without this file :(.......
please help me with a solution..........
thanks:)





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