[Dock-fans] how to deal with the result of DOCK except viewdock

John J. Irwin jji at cgl.ucsf.edu
Mon Apr 20 12:26:12 PDT 2009


Hi Qixu Cai

We recommend loading just the top 500 into Chimera. You can use splitmol
or molchunk.py (OEChem) or other tools to cut up a large mol2 into
managable chunks. 

Good docking

John
UCSF DOCK Team


CAI Qixu wrote:
> Hi, everyone,
> Is there some other software or scripts to deal with the result of
> DOCK, except viewdock in Chimera? Because when there are thousands of
> molecules, the viewdock in Chimera which deal with the result of DOCK
> is very very slow.
> ps: Anyone can tell me how to compile the legacy_accessories?
> Thank you very much!
> Qixu Cai
> Email: caiqixu at gmail.com <mailto:caiqixu at gmail.com>
> Xiamen University, Fujian, China
> ------------------------------------------------------------------------
>
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