[Dock-fans] is there "scored_mol_output_override"?

Scott Brozell sbrozell at rci.rutgers.edu
Mon Apr 20 19:02:39 PDT 2009


Hi,

On Sun, 19 Apr 2009, CAI Qixu wrote:

> Hi, everyone,
> Is there the parameter "scored_mol_output_override" in DOCK6.2? It seems
> that there is this parameter in early version of DOCK.

scored_mol_output_override was in release 5.3.
And the name was changed in release 5.4 to
scored_conformer_output_override
http://dock.compbio.ucsf.edu/Old_Versions/DOCK_5/DOCK_v5.4.0.htm
no 
yes, no
This flag causes all ligands to be written to outfile_scored.mol2, even when rank_ligands is true

This feature was removed in 6.1
http://dock.compbio.ucsf.edu/DOCK_6/new_in_6.1.txt

Scott



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