[Dock-fans] An error

Xu Dong hslinhc at gmail.com
Mon Mar 9 11:29:15 PDT 2009


Hi All,
When I preparing AchE enzyme surface, I use,
     sphgen -i INSPH -o OUTSPH

and it says:

   fmt: read unexpected character
   apparent state: unit 2 named temp2.sph
   last format: (2I5,F8.4,I8,4F12.6)
   lately reading sequential formatted external IO
   Abort

and the output shows that:

 density type = X
 reading  nasurface.ms
type   R
 # of atoms =   4210   # of surf pts =  *****
 finding spheres for   nasurface.ms

 dotlim =     0.000
 radmax =    4.000
 Minimum radius of acceptable spheres?
  1.39999998
 output to
naspheres.sph
 error reading temp2.sph
    0   75  3.9213  105158    0.077739   36.940884   54.919117   47.742725

I wonder what possible problem may lead to this?
Thank you all.

-- 
Dong Xu
Stony Brook AMS
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