[Dock-fans] Could not find a valid orientation

[Xinyu Guan]

Hi, all,
I have met several problems when I conducted docking.

First, when I ran dock6, the program stopped spontaneously and the .out file
said:
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ERROR:  Could not find a valid orientation.

         (For rigid docking the sought orientation is the whole ligand;

         for flexible docking the sought orientation is the anchor.)

         Confirm that all spheres are inside the grid box

and that the grid box is big enough to contain an orientation.

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The second problem is, when I tried to screened out some ligands form a
large mol2 (contains 1000 zinc ligands), the program would stop with

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Error: memory exhausted!Segmentation fault.

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Thank you very much!
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