[Dock-fans] how to dock two proteins?

John J. Irwin jji at cgl.ucsf.edu
Fri Mar 20 10:02:01 PDT 2009


Hi Cai Qixu

May I suggest you look at http://capri.ebi.ac.uk/ for the current state
of the art in protein protein docking?

Good docking

John
UCSF DOCK Team


CAI Qixu wrote:
> Hi, everyone,
> I want to use DOCK6.2 to find out whether the two proteins can
> interact. How to do the docking of two proteins? I just know the
> parameter "use_ligand_spheres" is necessary. Is there any tutorial?
> such as the grid parameters?
> Thank you very much! Good luck!
>
> -- 
> Cai Qixu
> Email: caiqixu at gmail.com <mailto:caiqixu at gmail.com>
> ------------------------------------------------------------------------
>
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