[Dockdev] Can DOCK be run a compute cluster?

[Faye Schilkey]

Excellent John!

Thanks,
-Faye

----- Original Message ----- 
From: "John Irwin" <jji at cgl.ucsf.edu>
To: "'Faye Schilkey'" <fds at ncgr.org>; <dockdev at docking.org>
Sent: Wednesday, March 02, 2005 7:39 AM
Subject: RE: [Dockdev] Can DOCK be run a compute cluster?


> Hi Faye
> 
> DOCK5 can be run in fine-grain parallel with MPI. Previous versions of DOCK
> can be run in coarse-grain parallel by splitting the database up, running
> each on a separate node, and combining the results at the end. 
> 
> Hope this helps!
> 
> John Irwin http://johnirwin.compbio.ucsf.edu
> 
> > -----Original Message-----
> > From: dockdev-bounces at docking.org 
> > [mailto:dockdev-bounces at docking.org] On Behalf Of Faye Schilkey
> > Sent: Tuesday, March 01, 2005 5:00 PM
> > To: dockdev at docking.org
> > Subject: [Dockdev] Can DOCK be run a compute cluster?
> > 
> > Greetings,
> > 
> > Can DOCK be run on Linux Redhat compute cluster with 128 nodes?
> > 
> > Any information related to this would be great!
> > 
> > Thanks,
> > -Faye
> > 
> > _______________________________________________
> > Dockdev mailing list
> > Dockdev at docking.org
> > http://blur.compbio.ucsf.edu/mailman/listinfo/dockdev
> > 
> 
> 
> 
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