[Dockdev] docking:protein-DNA

[Beisi Xu]

700 atoms is not that much...
try dynamics arrays like vector in C++

On Tue, Jul 15, 2008 at 9:31 AM,  <jingxing at vt.edu> wrote:
> Hello,
>
>   I am trying to dock protein with DNA (ligand). But the DNA is too big, with
> about 700 atoms.
>   When I ran it, it tells me memory exhausted.
>   Is there anyone who knows what I can do?
>   Thank you very much.
>
> Jing
> Bio
> Virginia Tech
>
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> http://blur.compbio.ucsf.edu/mailman/listinfo/dockdev
>



-- 
Beisi Xu, Ph.D Candidate
PSE at USTC
Zhou at CCBB@IUPUI
Phone:	+1-814-441-6038
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