[Zinc-fans] zinc in catalyst format

John J. Irwin jji at cgl.ucsf.edu
Thu Dec 20 10:42:54 PST 2007


Hi Prasanna

Catalyst should offer a tool to convert .sdf to .bdb.

>From google "convert sdf catalyst bdb":

Here's a reference to a guy who can do it (but he has other problems)
http://server.ccl.net/chemistry/resources/messages/2006/11/15.008-dir/index.html

>From google "catalyst bdb"
Here's a reference that clearly implie that it is possible with the
"CatDB" tool.
http://www.accelrys.com/reference/cases/studies/fliptutorial.pdf

Good luck!

John

Sivaprakasam Prasanna wrote:
> Hi all,
> I am wondering about any ways I can get Zinc subsets in catalyst 
> software database format to do virtual screening. Right now I cant 
> convert Zinc .sdf database to catalyst .bdb format.
> Any help?
> Prasanna
>
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