[Zinc-fans] problem with Search and Browse utility
marc
marc at plasmodium.sfsu.edu
Mon Dec 1 16:55:32 PST 2008
Dear Zinc Fans,
I'm guessing and hoping this is just a transient problem, but quite a
few times today and over the last couple weeks I've tried copying and
pasting a series of ZINC codes into the "Search and Browse" utility
(http://zinc.docking.org/choose.shtml), pressing the QUERY DATABASE
button, and then getting an error saying that none of the codes could be
found. I am not applying any filters, simply going to the Search and
Browse screen, pasting the hits, and doing the search. The typical
response I get is below (bold faced by me):
--- sample response---
Performing the following mappings of retired ZINC codes... 3053242 ->
6170051 2888645 -> 4821153 2798501 ->
4977973 5248663 -> 17837111 *No hits found* select s.sub_id,s.smiles
from substance s, protomer p, catalog_item ci,
catalog c , zinctmp.qury q where s.sub_id = ci.sub_id_fk and
ci.cat_id_fk = c.cat_id and c.free=1 and p.sub_id_fk
= s.sub_id and q.qury_id = 108894 and q.sub_id = s.sub_id limit 0,500
--------------------
The data I'm pasting is shown below. I know the response is erroneous
because if I paste subsets of this codes (like the first couple of
them), the search is successful. Furthermore, if I try the search a
few more times it eventually works. Just thought I'd report this in
case no one else has noticed it.
-marc
ZINC08952177
ZINC05395982
ZINC02298507
ZINC00867391
ZINC05664474
ZINC02098728
ZINC01590394
ZINC03053242
ZINC12196956
ZINC02474955
ZINC07885472
ZINC02888645
ZINC06453729
ZINC12196853
ZINC13040948
ZINC01080851
ZINC02798501
ZINC12628329
ZINC12628329
ZINC05028785
ZINC08952046
ZINC05248663
ZINC11727470
ZINC00869237
--
Marc Anderson, Ph.D.
Assistant Professor of Chemistry
Department of Chemistry and Biochemistry
San Francisco State University
San Francisco, CA 94132-4136
Office: (415) 338-6495
Fax: (415) 405-0377
Email: marc at sfsu.edu
Web: http://plasmodium.sfsu.edu/~marc/research
(for UPS/FedEx shipments, Thornton Hall, Room 706)
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