[Zinc-fans] Usual and Ref Discrepency
T. Andrew Binkowski
abinkowski at anl.gov
Thu Jul 16 14:12:32 PDT 2009
Hi John,
If you download the leads-now (subset 21) for the "usual" molecules
you will find ZINC00403313 listed in 21_p0.0.mol2 file downloaded from
the script. If you use the Search on the website and enter the zinc
id, the results show that there is only a ref molecule available for
download.
Here's the result:
Download: Show Detail?
ZINC ID
Supplier information; Representations
Properties:xLogP, ap & p desolvation, HBD,HBA,Charge,Mwt,NRB
Annotations; Similarity Structure
Click for quick 3D display
403313
#1
Aurora Feinchemie: kasf-120716
PubChem: 4589027
ref: mol2, SDF, SMILES, flexibase
0.02,-0.86,-15.47,1,4,0, 211.242, 2
In general, should there be at least 1 usual molecule for every
reference molecule? I find that this is not the case from my
downloaded sets and am wondering if there is a reason for this.
Thanks,
Andrew
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